PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G030500.1.p
Common NamePRUPE_ppa017791mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 236aa    MW: 27429.7 Da    PI: 9.8946
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G030500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.83.4e-0783128555
                         HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         h  +Er RR++ ++++  L ++lP+ a      K +K  i++++   I++Lq
  Prupe.1G030500.1.p  83 HMLNERMRREKQKQSYMALHSMLPTgA------KSDKNWIVQMTAMNIQQLQ 128
                         6789*********************66......899999*****99999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.67E-1077138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.53778127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.08E-482129No hitNo description
PfamPF000101.3E-483128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-683142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MNMDQYILEA LEGEFLLHES LPVLNQRAFV PYTSRPITEK GLDKPPNSMN MNKRMVQFLR  60
KSWAPATARI VTGDDCKERG FRHMLNERMR REKQKQSYMA LHSMLPTGAK SDKNWIVQMT  120
AMNIQQLQRY KEELRKRNME VEAILVANEK ERVNWSKIRL RVANPTSGVD SMLEVLRCLQ  180
YLGLKARNVR SNFSAQEFSA ELEIETKIGA AEIEEALQET LYEAERKLRF SFPGR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007227265.11e-176hypothetical protein PRUPE_ppa017791mg
TrEMBLM5XRD41e-176M5XRD4_PRUPE; Uncharacterized protein
STRINGSolyc09g083360.2.18e-58(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-45bHLH family protein